Molecular tests to speed up sepsis microbe ID at Indonesia’s national referral hospital
Official title: Molecular-based Optimization of Pathogen Identification in Sepsis Patients in the Indonesian National Referral Hospital
Run by Dr Cipto Mangunkusumo General Hospital · NCT07841535 · Data updated 2026-11-12
This study tests whether Hybrispot DNA Flow and metagenomic sequencing can identify sepsis-causing microbes faster than standard blood culture in adult patients at a major Indonesian hospital.
Quick facts
| Study type | Interventional |
|---|---|
| Ages | 18 Years and up |
| Sex | All |
| Enrollment | 415 (estimated) |
| Sponsor | Dr Cipto Mangunkusumo General Hospital Academic / other |
| Locations | 1 site (Jakarta, DKI Jakarta) |
| Status | Recruiting |
| Started | September 1, 2026 |
| Main results expected | August 31, 2027 |
| Study ends | December 31, 2027 |
| Registry record updated | September 25, 2026 |
| Trial ID | NCT07841535 on ClinicalTrials.gov |
Is this trial a fit for you?
✓Likely a good fit
Adults (18+) with sepsis or septic shock at RSCM who are at risk for multidrug-resistant pathogens and undergoing standard microbiological testing.
✕Probably not a fit
Patients without multidrug-resistant risk factors or those whose infection is not detectable by the molecular methods may not see a benefit.
A plain-English reading of the study's rules. Only the study team can confirm whether you qualify.
What this trial studies
In adults with sepsis or septic shock at Dr. Cipto Mangunkusumo General Hospital, researchers compare standard blood culture to two molecular methods—Hybrispot DNA Flow and metagenomic sequencing—to see which identifies pathogens fastest. They will measure how quickly each method provides results and how that timing might influence the start of targeted antimicrobial therapy and patient outcomes. The trial uses a standard-of-care design with these molecular tests added to routine diagnostic workflows. Here, turnaround time and potential clinical impact are the primary focus, with safety and feasibility assessed in the local setting.
Why it matters
Potential benefit: If successful, faster and accurate pathogen identification could lead to quicker, more targeted antimicrobial therapy and better outcomes for septic patients.
How similar studies have gone: Previous work suggests molecular diagnostics can shorten time to organism identification, but results vary by setting and pathogen; this study adds context in Indonesia.
Who can join: the full rules
Show full inclusion / exclusion criteria
Inclusion Criteria: * Age ≥18 years. * Sepsis or septic shock according to Sepsis-3 criteria, defined as suspected or confirmed infection with acute organ dysfunction (SOFA score increase ≥2 points from baseline) within 24 hours of inclusion. * Hospitalized at RSCM and undergoing microbiological testing, including blood culture as part of standard care. * At least one risk factor for multidrug-resistant (MDR) pathogens according to the 2026 Surviving Sepsis Campaign, including: * Previous colonization or infection with a relevant MDR pathogen. * Prolonged exposure to broad-spectrum antibiotics. * Prolonged hospitalization in a setting with a high prevalence of MDR pathogens, such as the ICU or a ward with a high antimicrobial resistance burden. * Written informed consent from the patient or legal representative, where applicable for prospective enrollment. Exclusion Criteria: * Unable to provide specimens according to the study protocol. * Received intravenous antimicrobial regimen for more than 24 hours prior to study enrollment, with the regimen continued as empirical therapy for the current sepsis diagnosis. * Opt out of best treatment according to medical advice. Dropout criteria: \- Discharge from the hospital or death within 24 hours after blood collection.
Where it's running
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Dr Cipto Mangunkusumo General Hospital
Jakarta, DKI Jakarta, Indonesia Recruiting
Study contacts
- Principal investigator: Robert Sinto, MD, MSc.Clin.Ed, D.Phil — Dr Cipto Mangunkusumo General Hospital
- Study coordinator: Robert Sinto, MD, MSc.Clin.Ed, D.Phil
- Email: robert.sinto01@ui.ac.id
- Phone: +628158835432
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How to take part
- Review the eligibility criteria above with your treating physician.
- Check the official listing on ClinicalTrials.gov for the latest contact details and recruitment status.
- Contact the study coordinator or principal investigator to ask for pre-screening. Pre-screening is free and never obligates you to enroll.