Epilepsy and gut and mouth bacteria: linking microbiota to seizure medicine response

EPIGUT: EPILEPSY AND GASTROINTESTINAL MICROBIOTA: UNDERSTANDING THERAPY RESPONSE

Observational Karolinska Institutet · NCT07253701

This project will test whether differences in gut and mouth bacteria are linked to epilepsy type and change how well seizure medicines work in people newly diagnosed with epilepsy compared with healthy volunteers.

Quick facts

Study typeObservational
Enrollment1500 (estimated)
Ages2 Years to 79 Years
SexAll
SponsorKarolinska Institutet Academic / other
Locations6 sites (Gothenburg and 5 other locations)
Trial IDNCT07253701 on ClinicalTrials.gov

What this trial studies

EpiGUT will enroll treatment-naïve people with newly diagnosed epilepsy and matched healthy controls and collect saliva and fecal samples to profile the oral and gut microbiota. Blood and CSF samples will be analyzed for metabolic and inflammatory markers to explore systemic and central pathways linking microbes to seizures and drug response. Participants will be followed longitudinally to see how baseline microbiota relate to later response to anti-seizure medications, and selected microbe–drug interactions will be tested in vitro. The goal is to identify microbial signatures and mechanisms that could inform personalized anti-seizure therapy.

Who should consider this trial

Good fit: Ideal candidates are people aged 2–79 with newly diagnosed, treatment-naïve epilepsy who have not used antibiotics or probiotics in the past three months and who do not have major gastrointestinal disease or other listed exclusions.

Not a fit: People already taking anti-seizure medication, those who recently used antibiotics or probiotics, have major gastrointestinal surgeries or diagnoses, obesity (BMI > 30), type 2 diabetes, strict exclusion diets, pregnancy or breastfeeding, or feeding tubes are unlikely to benefit from enrolling.

Why it matters

Potential benefit: If successful, the findings could help personalize anti-seizure medication choices using a person's gut microbiota to reduce seizures or side effects.

How similar studies have performed: Animal studies and small human cohorts suggest the microbiota can affect seizure risk and drug response, but human evidence is limited and this larger longitudinal cohort is novel.

Eligibility criteria

Show full inclusion / exclusion criteria
Inclusion Criteria:

* Patients: Age 2-79 years, newly diagnosed with epilepsy, treatment-naive at time of enrollment
* Controls: Age 2-79 years

Exclusion Criteria:

* Patients: already started ASM treatment (more then one dose), has used antibiotics or probiotics in the last three months, has a gastrointestinal diagnosis, has surgically removed parts of the GIT, obesity (BMI\>30), T2D, follows a strict exclusion diet, is pregnant or breastfeeding, has a gastrostomy, PEG or jejunostomy
* Controls: previous epilepsy diagnosis or ASM treatment, has used antibiotics or probiotics in the last three months, has a gastrointestinal diagnosis, has surgically removed parts of the GIT, obesity (BMI\>30), T2D, follows a strict exclusion diet, is pregnant or breastfeeding, has a gastrostomy, PEG or jejunostomy

Where this trial is running

Gothenburg and 5 other locations

Study contacts

How to participate

  1. Review the eligibility criteria above with your treating physician.
  2. Visit the official trial page on ClinicalTrials.gov for the most current contact information and recruitment status.
  3. Contact the listed study coordinator or principal investigator to request pre-screening. Pre-screening is free and never obligates you to enroll.
Conditions EpilepsyMicrobiotaProteomicsMetabolomicsBiomarker Discoveryseizuresmicrobiomeanti-seizure medication
Last reviewed 2026-06-13 by the Find a Trial editorial team. Information on this page is for educational purposes and is not medical advice. Always consult qualified healthcare professionals about clinical trial participation.