Clinical trial Recruiting at 9 sites Phase1; Phase2 Interventional Ages 18 to 75

MGT-006 safety and dosing study for ulcerative colitis

Official title: Phase 1b/2a Study of MGT-006 in Patients With Ulcerative Colitis: A Dose and Preparation Regimen Selection Trial to Assess Safety and Microbiome Engraftment (ROOT Study)

Run by Metagen Therapeutics, Inc. · NCT07913347 · Data updated 2026-11-12

This study tests an oral microbiome capsule called MGT-006 to see if it is safe and tolerable in adults with moderately active ulcerative colitis, and whether the gut bacteria engraft after treatment.

Quick facts

PhasePhase1; Phase2
Study typeInterventional
Ages18 Years to 75 Years
SexAll
Enrollment54 (estimated)
SponsorMetagen Therapeutics, Inc.
Industry-sponsored
Locations12 sites (Naples, Florida and 11 other locations)
StatusRecruiting
StartedJuly 9, 2026
Main results expectedMarch 31, 2028
Study endsSeptember 30, 2028
Registry record updatedNovember 3, 2026
Trial IDNCT07913347 on ClinicalTrials.gov

Is this trial a fit for you?

Likely a good fit

Adults aged 18–75 with moderately active ulcerative colitis (modified Mayo score 4–7) confirmed by endoscopy and histology.

Probably not a fit

Participants with severe disease, certain medical histories, or intolerance to study antibiotics or components of MGT-006 may not benefit.

A plain-English reading of the study's rules. Only the study team can confirm whether you qualify.

What this trial studies

This multicenter, early-phase study investigates repeated oral doses of MGT-006 in adults with moderately active ulcerative colitis. Phase 1b compares three pretreatment strategies (no antibiotics, vancomycin, or an AFM antibiotic combination) followed by eight weeks of MGT-006 administration and a four-week observation. Phase 2a plans to explore different doses and regimens based on Phase 1b findings, with assent to pretreatment chosen from Phase 1b. Endpoints include safety, tolerability, microbiome engraftment, and preliminary signals of clinical effect. The study is open-label and will enroll approximately 18 participants in Phase 1b and about 36 in Phase 2a across sites in Japan and the United States.

Why it matters

Potential benefit: If successful, participants may experience improvements in ulcerative colitis symptoms and inflammation due to microbiome engraftment.

How similar studies have gone: This approach of microbiome-based therapy has shown early signals in related fecal microbiota transplantation research, though the exact regimen is investigational.

Who can join: the full rules

Show full inclusion / exclusion criteria
Inclusion Criteria:

1. Patients who understand the contents of this clinical study, sign a written informed consent form, and possess the willingness and capability to participate in all medical examinations, evaluations, and follow-ups related to the study.
2. Patients aged 18 to 75 years at the time of informed consent
3. Patients who have been diagnosed with UC through endoscopic and histological examination for at least 12 weeks at the time of final registration
4. Patients with a modified Mayo Score of 4 to 7 at the time of final registration

Exclusion Criteria:

1. Patients with any of the following medical history or complications, or those undergoing concomitant therapy, which the investigator (sub-investigator) to be serious or clinically significant
2. Patients with past or concurrent malignant tumors; however, cured basal cell carcinoma of the skin is allowed for registration. In addition, breast cancer in remission for \>= 10 years without recurrence is allowed for registration, and other malignant tumors in remission for \>= 5 years are allowed for registration if no therapeutic intervention is required and they are in stable condition, as determined by the investigator (sub-investigator).
3. Patients with pancolitis of \> 8 years' duration or left-sided colitis of \> 8 years' duration who have not undergone a surveillance flexible sigmoidoscopy or total colonoscopy (performed according to local standard of care) within 12 months prior to screening to rule out colorectal dysplasia/cancer.
4. Patients with suspected or confirmed colorectal cancer or high-grade dysplasia.
5. Patients with any of the following abnormal values in clinical laboratory tests performed within 4 weeks prior to final registration in this clinical study:

   * Patients with a serum creatinine level of \>= 2.0 mg/dL or a BUN level of \>= 25 mg/dL
   * Patients with a total bilirubin level of \>= 3.0 mg/dL, or an AST (GOT) or ALT (GPT) level of \>= 100 IU/L
6. Patients with any of the following will be excluded:

   * HBsAg positive
   * HCV antibody positive
   * HIV-1/2 Ag/Ab screening-positive
7. Patients currently receiving inpatient treatment for UC
8. Patients suspected to have concurrent active intestinal obstruction or infectious enteritis
9. Patients with Clostridioides difficile infection (C. difficile infection) (patients in whom the presence or absence of infection is confirmed by NAAT and the result is positive)
10. Patients with a history of hypersensitivity or allergy to excipients in MGT-006
11. Patients with any of the following conditions that affect the lower gastrointestinal function
12. Patients who have failed or been intolerant to \>= 3 advanced-therapy mechanistic classes for ulcerative colitis (e.g., anti-TNF, anti-integrin, anti-IL-12/23, JAK inhibitor, S1P modulator)
13. Patients who have used another investigational product within 12 weeks prior to informed consent
14. Patients with serious allergies or contraindications to any drug used in this study
15. (Females only) Patients in whom the result of a pregnancy test performed within 4 weeks prior to final registration is positive (if a urine hCG test is positive, a negative serum pregnancy test result should be confirmed)
16. (Females only) Patients who are pregnant or breastfeeding, or females of childbearing potential unable to use appropriate contraceptive methods from the date of informed consent to 12 weeks post-treatment. (e.g., intrauterine device, diaphragm, partner's use of condom)
17. (Males only) Patients who are males of reproductive potential (including partners of childbearing potential) unable to use at least one effective contraceptive method from the time of informed consent until 12 weeks after the end of investigational drug administration
18. Patients judged by the investigator (sub-investigator) to be inappropriate as subjects of this study
19. (Phase 2a only) Participants who have previously received MGT-006

Where it's running

  • Fukuoka University Hospital
    Fukuoka, Fukuoka, Japan
    Recruiting
  • Sapporo Medical University Hospital
    Sapporo, Hokkaido, Japan
    Recruiting
  • Kawasaki Medical School Hospital
    Kurashiki, Okayama-ken, Japan
    Recruiting
  • Kansai Medical University Hospital
    Hirakata, Osaka, Japan
    Recruiting
  • Hamamatsu University Hospital
    Hamamatsu, Shizuoka, Japan
    Recruiting
  • Juntendo University Hospital
    Bunkyō-Ku, Tokyo, Japan
    Recruiting
Show 6 more locations
  • The Jikei University Hospital
    Minato-Ku, Tokyo, Japan
    Recruiting
  • Kitasato University Kitasato Institute Hospital
    Minato-Ku, Tokyo, Japan
    Recruiting
  • Kyorin University Hospital
    Mitaka, Tokyo, Japan
    Recruiting
  • GI PROS, Inc.
    Naples, Florida, United States
    Not yet recruiting
  • Brigham and Women's Hospital
    Boston, Massachusetts, United States
    Not yet recruiting
  • NYU Langone Health
    New York, New York, United States
    Not yet recruiting

Study contacts

Similar studies

Other studies for the same condition or treatment. Recruiting studies are listed first.

  • Oral LY4268989 for adults with moderate to severe ulcerative colitis.

    This tests whether an oral medicine called LY4268989 helps adults with moderate to severe ulcerative colitis more than a placebo.

    Recruiting at 197 sites Phase 2 Eli Lilly and Company · Phoenix, Arizona and 257 other locations · NCT07415044

  • PALI-2108 vs placebo for moderate to severe ulcerative colitis

    A phase 2 study to see if PALI-2108 helps people with moderate to severe ulcerative colitis more than a placebo.

    Recruiting at 28 sites Phase 2 Palisade Bio · Sun City, Arizona and 114 other locations · NCT07845487

  • Nitazoxanide as an add-on therapy for mild-to-moderate ulcerative colitis

    A study tests whether adding nitazoxanide to standard UC treatment helps people with mild-to-moderate ulcerative colitis see more relief.

    Recruiting at 2 sites Phase 2/3 Tanta University · Tanta and 1 other locations · NCT07820046

  • Fecal Transplants from Dai vs Han Donors for Ulcerative Colitis

    This study tests whether fecal microbiota transplantation from healthy Dai donors improves symptoms in adults with ulcerative colitis more than transplantation from healthy Han donors.

    Recruiting Phase 2 First Affiliated Hospital of Kunming Medical University · Kunming, Yunnan · NCT07814456

  • Familial IBD Early Risk

    This study tests whether clinical, environmental, and immune factors in first-degree relatives of people with Crohn’s disease or ulcerative colitis can predict who will develop IBD.

    Recruiting Seattle Children's Hospital · Seattle, Washington · NCT07791862

  • Probiotics and Trace Elements Added to Infliximab in Ulcerative Colitis

    This trial tests whether adding a Lactobacillus probiotic or trace elements to infliximab helps people with ulcerative colitis stay in remission.

    Recruiting Phase 4 National Hepatology & Tropical Medicine Research Institute · Cairo · NCT07758335

How to take part

  1. Review the eligibility criteria above with your treating physician.
  2. Check the official listing on ClinicalTrials.gov for the latest contact details and recruitment status.
  3. Contact the study coordinator or principal investigator to ask for pre-screening. Pre-screening is free and never obligates you to enroll.
Last reviewed 2026-11-14 by the Find a Trial editorial team. Information on this page is for educational purposes and is not medical advice. Always consult qualified healthcare professionals about clinical trial participation.