How Salmonella hides and survives inside human gut and immune cells

Decoding host-pathogen crosstalk that drives intracellular niche formation during Salmonella infection

NIH-funded research University of Vermont & St Agric College · NIH-11232359

Researchers are comparing how Salmonella lives inside different human gut and immune cells to learn what helps it survive and trigger cell death.

Quick facts

Grant typeR21 grant
Study typeNIH-funded research
Funding institutionUniversity of Vermont & St Agric College NIH-funded
Lab location1 site (Burlington, United States)
Project IDNIH-11232359 on NIH RePORTER

What this research studies

This project looks at Salmonella infections in human intestinal epithelial cells and macrophages to see whether bacteria live inside membrane-bound vacuoles or free in the cell cytosol. Scientists will use fluorescently labeled bacteria, sort infected cells by their bacterial niche with FACS, and read both bacterial and human gene activity from those sorted cells using dual RNA-seq. By comparing the bacterial and host transcripts in the two niches, they hope to identify which genes and pathways let Salmonella survive or cause cell death. Those findings may point to new targets for treatments or prevention of severe Salmonella infections.

Who could benefit from this research

Good fit: Ideal candidates would include people with recent non-typhoidal Salmonella infection or volunteers willing to provide blood or tissue samples for research.

Not a fit: Patients with conditions unrelated to Salmonella infection are unlikely to receive direct benefit from this specific research.

Why it matters

Potential benefit: If successful, this work could reveal new targets to prevent or treat Salmonella by blocking how the bacteria survive inside human cells.

How similar studies have performed: Dual RNA-seq and cell-sorting approaches have helped reveal host-pathogen interactions in other bacterial infections, but applying them to compare cytosolic versus vacuolar Salmonella niches is relatively new.

Where this research is happening

Burlington, United States

Researchers

About this research

  1. This is an active NIH-funded research project — typically early-stage science, not a clinical trial accepting patient enrollment.
  2. Some NIH-funded labs run parallel clinical studies or seek volunteers for related work. To check, contact the principal investigator or institution listed above.
  3. For full project details, budget, and progress reports, visit the official NIH RePORTER page below.
Conditions Bacterial InfectionsCandidate Disease Gene
Last reviewed 2026-06-13 by the Find a Trial editorial team. Information on this page is for educational purposes and is not medical advice. Always consult qualified healthcare professionals about clinical trial participation.