Three-dimensional tumor models and genomic profiling for pediatric brain tumors

Preliminary Study With Biological Samples, Single-center, Non-profit, to Identify Biological Mechanisms and Resistance to Therapies in Three-dimensional Models Derived From Brain Tumors in Pediatric Patients.

Not applicable Interventional Meyer Children's Hospital IRCCS · NCT07417072

This project will use tumor tissue and blood from children aged 3–18 undergoing neurosurgery to build 3D tumor models and run advanced genomic tests to see if they better characterize tumors and help guide personalized treatment.

Quick facts

PhaseNot applicable
Study typeInterventional
Enrollment50 (estimated)
Ages3 Years to 18 Years
SexAll
SponsorMeyer Children's Hospital IRCCS Academic / other
Drugs / interventionschemotherapy
Locations1 site (Florence, Firenze)
Trial IDNCT07417072 on ClinicalTrials.gov

What this trial studies

The project collects tumor tissue and peripheral blood from treatment‑naive children aged 3–18 at the time of planned neurosurgery. Samples will undergo third‑generation sequencing and comprehensive genomic and epigenetic analyses to identify tumor alterations and germline information. Patient‑derived three‑dimensional tumor models will be generated to study biology and perform preclinical drug response testing. The integrated dataset aims to support personalized therapeutic strategies and improve preclinical evaluation pipelines for pediatric brain tumors.

Who should consider this trial

Good fit: Children aged 3–18 with suspected brain tumors who are treatment‑naive, scheduled for neurosurgery, and whose legal guardians provide informed consent are ideal candidates.

Not a fit: Patients later found to have non‑neoplastic brain conditions, those with insufficient tissue or blood for analysis, or those who received prior systemic anticancer therapy are unlikely to benefit from this protocol.

Why it matters

Potential benefit: If successful, this approach could reveal actionable genetic alterations and provide personalized preclinical models to help choose more effective therapies for children with brain tumors.

How similar studies have performed: Genomic profiling and patient‑derived 3D models have shown promise in preclinical work and some adult and pediatric cohorts, but fully integrated personalized pipelines for pediatric brain tumors remain limited.

Eligibility criteria

Show full inclusion / exclusion criteria
Inclusion Criteria:

* Patients aged 3-18 years with suspected brain tumours undergoing neurosurgery
* No previous bone marrow transplants or other haematological procedures that could potentially interfere with germline analysis.
* Patients who have not received any systemic anticancer treatment (including chemotherapy, radiotherapy or targeted therapies) prior to enrolment surgery.
* Signature of informed consent

Exclusion Criteria:

* Subsequent histological confirmation of non-neoplastic brain pathology (e.g. malformations, inflammatory lesions, demyelinating processes).
* Insufficient quantity or quality of tumour tissue or peripheral blood for the analyses required by the protocol.
* Presence of serious clinical conditions, systemic infections or haemodynamic instability that contraindicate the collection of biological samples or inclusion in the study.

Where this trial is running

Florence, Firenze

Study contacts

How to participate

  1. Review the eligibility criteria above with your treating physician.
  2. Visit the official trial page on ClinicalTrials.gov for the most current contact information and recruitment status.
  3. Contact the listed study coordinator or principal investigator to request pre-screening. Pre-screening is free and never obligates you to enroll.
Conditions Pediatric Brain TumorsGenomicsEpigenetic
Last reviewed 2026-06-13 by the Find a Trial editorial team. Information on this page is for educational purposes and is not medical advice. Always consult qualified healthcare professionals about clinical trial participation.