Using blood tests and single-cell epigenetics to detect aggressive changes in prostate cancer

Mapping the epigenetic dynamics of prostate cancer progression: integrating liquid biopsies and single-cell epigenomics for early detection of lineage plasticity and clinical decision-making

NIH-funded research Dana-Farber Cancer Inst · NIH-11507481

Researchers will use blood-based liquid biopsies and single-cell epigenetic tests to look for early signs that prostate cancer is becoming resistant to hormone treatments in men with advanced disease.

Quick facts

Grant typeR01 grant
Study typeNIH-funded research
Funding institutionDana-Farber Cancer Inst NIH-funded
Lab location1 site (Boston, United States)
Project IDNIH-11507481 on NIH RePORTER

What this research studies

You would be asked to give blood and, when available, tumor samples so researchers can study epigenetic marks at the single-cell level. The team will combine liquid biopsy data with single-cell epigenomic profiles from clinically annotated specimens to track when prostate cancer cells change identity (lineage plasticity). They are particularly focused on spotting early emergence of neuroendocrine prostate cancer and patterns linked to resistance to AR-targeted drugs like enzalutamide. The goal is to develop epigenetic signatures from these samples that could guide future treatment choices.

Who could benefit from this research

Good fit: Men with advanced or castration-resistant prostate cancer, especially those currently or previously treated with androgen receptor signaling inhibitors like enzalutamide, would be the best fit to participate.

Not a fit: Men with low-risk, localized prostate cancer who have never received AR-targeted therapy are unlikely to benefit directly from this project.

Why it matters

Potential benefit: If successful, this work could help detect treatment-resistant or more aggressive prostate cancer earlier so doctors can change therapies sooner.

How similar studies have performed: Liquid biopsies and epigenetic biomarkers have shown promise for monitoring cancer, but using single-cell epigenomics to predict neuroendocrine transformation and ARSI resistance is a newer approach with limited clinical proof so far.

Where this research is happening

Boston, United States

Researchers

About this research

  1. This is an active NIH-funded research project — typically early-stage science, not a clinical trial accepting patient enrollment.
  2. Some NIH-funded labs run parallel clinical studies or seek volunteers for related work. To check, contact the principal investigator or institution listed above.
  3. For full project details, budget, and progress reports, visit the official NIH RePORTER page below.
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Last reviewed 2026-06-13 by the Find a Trial editorial team. Information on this page is for educational purposes and is not medical advice. Always consult qualified healthcare professionals about clinical trial participation.