Tracking infections and antibiotic resistance in newborns in hospitals

Metagenomic surveillance of pathogen and antimicrobial resistance gene transmission in hospitalized neonates

NIH-funded research University of California, San Francisco · NIH-10947659

This study is looking at how germs and antibiotic resistance spread among newborns in NICUs, and it aims to find better ways to keep babies safe from infections while they're in the hospital.

Quick facts

Grant typeNIH-funded research
Study typeNIH-funded research
Funding institutionUniversity of California, San Francisco NIH-funded
Lab location1 site (San Francisco, United States)
Project IDNIH-10947659 on NIH RePORTER

What this research studies

This research investigates how infections and antibiotic resistance spread among newborns in neonatal intensive care units (NICUs). By using advanced metagenomic sequencing techniques, the study will analyze samples from infants and their environments to identify pathogens and resistance genes. Patients will be monitored through weekly nasal and skin swabs, along with environmental samples, to understand how these infections are transmitted. The goal is to improve infection control strategies in hospitals and reduce the impact of healthcare-associated infections.

Who could benefit from this research

Good fit: Ideal candidates for this research are hospitalized neonates in NICUs who are at risk for healthcare-associated infections.

Not a fit: Patients who are not hospitalized in NICUs or who do not have risk factors for healthcare-associated infections may not benefit from this research.

Why it matters

Potential benefit: If successful, this research could lead to better prevention strategies for infections in newborns, ultimately reducing hospital stays and improving health outcomes.

How similar studies have performed: Previous research using metagenomic sequencing has shown promise in understanding pathogen dynamics and antibiotic resistance, indicating that this approach could be effective.

Where this research is happening

San Francisco, United States

Researchers

About this research

  1. This is an active NIH-funded research project — typically early-stage science, not a clinical trial accepting patient enrollment.
  2. Some NIH-funded labs run parallel clinical studies or seek volunteers for related work. To check, contact the principal investigator or institution listed above.
  3. For full project details, budget, and progress reports, visit the official NIH RePORTER page below.
Conditions Communicable Diseases
Last reviewed 2026-06-13 by the Find a Trial editorial team. Information on this page is for educational purposes and is not medical advice. Always consult qualified healthcare professionals about clinical trial participation.