Improving tools for analyzing and understanding DNA sequencing data
Methods for sequencing data analysis and archive-scale data science
['FUNDING_OTHER'] · JOHNS HOPKINS UNIVERSITY · NIH-11001936
This study is all about making it easier for scientists to understand DNA data, so they can find important information that helps with medical research and discoveries.
Quick facts
| Phase | ['FUNDING_OTHER'] |
|---|---|
| Study type | Nih_funding |
| Sex | All |
| Sponsor | JOHNS HOPKINS UNIVERSITY (nih funded) |
| Locations | 1 site (BALTIMORE, UNITED STATES) |
| Trial ID | NIH-11001936 on ClinicalTrials.gov |
What this research studies
This research focuses on developing and enhancing software tools that help biomedical researchers analyze and interpret DNA sequencing data more effectively. It aims to improve existing tools like Bowtie and Kraken 2, which are used for read alignment and metagenomics classification, respectively. The project will also create new systems that allow researchers to evaluate archived datasets for quality and relevance, enabling them to identify useful biological information without relying solely on metadata accuracy. By streamlining the process of data analysis, this research will facilitate better scientific discoveries and insights.
Who could benefit from this research
Good fit: Ideal candidates for participation or benefit from this research include biomedical researchers and scientists working with DNA sequencing data.
Not a fit: Patients who are not involved in biomedical research or do not work with DNA sequencing data may not receive any benefit from this research.
Why it matters
Potential benefit: If successful, this research could significantly enhance the ability of researchers to utilize archived DNA sequencing data, leading to improved understanding of biological processes and diseases.
How similar studies have performed: Previous research has shown success in developing similar bioinformatics tools, indicating a strong potential for this approach to yield valuable advancements.
Where this research is happening
BALTIMORE, UNITED STATES
- JOHNS HOPKINS UNIVERSITY — BALTIMORE, UNITED STATES (ACTIVE)
Researchers
- Principal investigator: LANGMEAD, BENJAMIN THOMAS — JOHNS HOPKINS UNIVERSITY
- Study coordinator: LANGMEAD, BENJAMIN THOMAS
About this research
- This is an active NIH-funded research project — typically early-stage science, not a clinical trial accepting patient enrollment.
- Some NIH-funded labs run parallel clinical studies or seek volunteers for related work. To check, contact the principal investigator or institution listed above.
- For full project details, budget, and progress reports, visit the official NIH RePORTER page below.