How small intestine bacteria may cause abdominal pain

MECHANISMS OF VISCERAL PAIN DRIVEN BY SMALL INTESTINAL MICROBIOTA

NIH-funded research Mayo Clinic Rochester · NIH-11141685

This project studies whether bacteria and their products in the small intestine cause belly pain in people with irritable bowel syndrome.

Quick facts

Grant typeR01 grant
Study typeNIH-funded research
Funding institutionMayo Clinic Rochester NIH-funded
Lab location1 site (Rochester, United States)
Project IDNIH-11141685 on NIH RePORTER

What this research studies

You would hear that the team uses human small intestinal microbes transplanted into germ-free mice to see how those microbes change gut sensation. They test microbial metabolites on isolated sensory nerve cells and on gut lining cells in the lab to see how signals are produced. They also use a novel ex vivo spinal cord–small intestine preparation to trace how gut signals reach the spinal cord. Together these approaches aim to identify the cells and molecular steps that make the gut overly sensitive.

Who could benefit from this research

Good fit: Adults with irritable bowel syndrome who have frequent abdominal pain and are willing to provide small intestinal samples or undergo clinic procedures would be the most relevant participants.

Not a fit: People whose pain results from structural GI disease, non-microbial causes, or other distinct diagnoses may not receive direct benefit from this research.

Why it matters

Potential benefit: If successful, this work could point to new therapies that target small intestinal microbes or their metabolites to reduce abdominal pain in IBS.

How similar studies have performed: Prior work has shown gut microbes and their metabolites can drive abdominal pain—mostly focusing on the colon—so applying these methods to the small intestine builds on known findings but is relatively new.

Where this research is happening

Rochester, United States

Researchers

About this research

  1. This is an active NIH-funded research project — typically early-stage science, not a clinical trial accepting patient enrollment.
  2. Some NIH-funded labs run parallel clinical studies or seek volunteers for related work. To check, contact the principal investigator or institution listed above.
  3. For full project details, budget, and progress reports, visit the official NIH RePORTER page below.
Last reviewed 2026-06-13 by the Find a Trial editorial team. Information on this page is for educational purposes and is not medical advice. Always consult qualified healthcare professionals about clinical trial participation.