How common gut Bacteroides protect themselves

Protective mechanisms of the gut Bacteroidales

NIH-funded research University of Chicago · NIH-11285459

This project looks at how common gut bacteria called Bacteroides defend themselves from other microbes and stress, which affects gut health for many people.

Quick facts

Grant typeR01 grant
Study typeNIH-funded research
Funding institutionUniversity of Chicago NIH-funded
Lab location1 site (Chicago, United States)
Project IDNIH-11285459 on NIH RePORTER

What this research studies

Researchers are studying how Bacteroidales species that live in the human colon respond when exposed to antibacterial toxins and other stresses. In the lab they use genetic reporters and tests of bacterial traits to see which genes turn on and how those changes protect the bacteria. The team focuses on a specific regulatory system called EcfO-Reo and the group of genes it controls, including unknown proteins, outer membrane porins, and factors that make long LPS. Understanding these responses helps explain why these bacteria persist in the gut over a lifetime.

Who could benefit from this research

Good fit: Adults who can provide stool samples (healthy volunteers or people with gut conditions) or who can travel to or send samples to the University of Chicago would be appropriate contributors.

Not a fit: People looking for an immediate new treatment or whose health issues are unrelated to the gut microbiome are unlikely to receive direct benefit from this research.

Why it matters

Potential benefit: If successful, this work could point to ways to support helpful gut bacteria or prevent harmful microbes from taking over.

How similar studies have performed: Prior laboratory work has shown that gut bacteria use antibacterial toxins and stress responses, but turning these basic findings into clinical treatments remains early and unproven.

Where this research is happening

Chicago, United States

Researchers

About this research

  1. This is an active NIH-funded research project — typically early-stage science, not a clinical trial accepting patient enrollment.
  2. Some NIH-funded labs run parallel clinical studies or seek volunteers for related work. To check, contact the principal investigator or institution listed above.
  3. For full project details, budget, and progress reports, visit the official NIH RePORTER page below.
Last reviewed 2026-06-13 by the Find a Trial editorial team. Information on this page is for educational purposes and is not medical advice. Always consult qualified healthcare professionals about clinical trial participation.