How a common gut virus affects intestinal health

Characterization of a commensal enteric virus

NIH-funded research University of Pennsylvania · NIH-11223354

The team is looking at whether a common gut virus changes immune signals and harms intestinal cells in people with genetic risk for Crohn's disease.

Quick facts

Grant typeR01 grant
Study typeNIH-funded research
Funding institutionUniversity of Pennsylvania NIH-funded
Lab location1 site (Philadelphia, United States)
Project IDNIH-11223354 on NIH RePORTER

What this research studies

Researchers use mice with an ATG16L1 gene mutation and lab-grown human intestinal tissue (organoids) from Crohn's patients to model how a commensal gut virus alters gut immunity. They examine how the virus reduces a T cell–produced anti-inflammatory protein called API5 and how losing API5 leads to inflammatory cell death (necroptosis) in Paneth cells that protect the gut lining. The work combines virus infection models, tissue and cellular analyses, and experiments on autophagy-related pathways. The research aims to map both epithelial-intrinsic and immune-driven signals that cause barrier defects seen in some forms of IBD.

Who could benefit from this research

Good fit: Ideal candidates are people with Crohn's disease—especially those known to carry the ATG16L1 risk variant—who can donate intestinal tissue samples or clinical data.

Not a fit: People without inflammatory bowel disease or without the ATG16L1 risk variant are less likely to see direct benefit from this work.

Why it matters

Potential benefit: If successful, this could point to ways to protect Paneth cells or restore API5 signaling to prevent or lessen intestinal barrier damage in Crohn's disease.

How similar studies have performed: Prior mouse and organoid work has shown ATG16L1 mutation plus norovirus can cause Paneth cell defects, but targeting API5 to prevent that damage is a newer and largely untested approach.

Where this research is happening

Philadelphia, United States

Researchers

About this research

  1. This is an active NIH-funded research project — typically early-stage science, not a clinical trial accepting patient enrollment.
  2. Some NIH-funded labs run parallel clinical studies or seek volunteers for related work. To check, contact the principal investigator or institution listed above.
  3. For full project details, budget, and progress reports, visit the official NIH RePORTER page below.
Last reviewed 2026-06-13 by the Find a Trial editorial team. Information on this page is for educational purposes and is not medical advice. Always consult qualified healthcare professionals about clinical trial participation.