Gene-editing and single-cell methods to find better cancer targets

Bay Area Cancer Target Discovery and Development

NIH-funded research University of California, San Francisco · NIH-11169791

Using CRISPR gene-editing together with single-cell and lineage-tracing tools to find combinations of targets that could lead to better treatments for people with breast and other cancers.

Quick facts

Grant typeU01 cooperative agreement
Study typeNIH-funded research
Funding institutionUniversity of California, San Francisco NIH-funded
Lab location1 site (San Francisco, United States)
Project IDNIH-11169791 on NIH RePORTER

What this research studies

This project uses CRISPR gene-editing screens, single-cell profiling, and lineage-tracing to map how different genes and cell states drive tumor growth and treatment resistance. Researchers test combinations of genetic targets in lab-grown tumor models and in vivo models to find weaknesses that can be exploited by drugs. They combine computational analysis and pharmacologic testing to prioritize targets that are most likely to work across diverse tumor cells. The goal is to move the most promising targets toward therapies that could help patients with resistant or heterogeneous tumors.

Who could benefit from this research

Good fit: Patients with breast cancer or other solid tumors, especially those with relapsed or treatment-resistant disease, would be most likely to benefit from findings and could be candidates for future clinical opportunities.

Not a fit: People with non-cancerous conditions or cancers not driven by the genetic changes studied are unlikely to receive direct benefit from this research.

Why it matters

Potential benefit: If successful, this work could reveal new drug targets and combinations that overcome tumor heterogeneity and therapy resistance, enabling more effective cancer treatments.

How similar studies have performed: CRISPR screening and single-cell approaches have identified promising targets in laboratory studies, but translating those findings into approved patient treatments is still early and ongoing.

Where this research is happening

San Francisco, United States

Researchers

About this research

  1. This is an active NIH-funded research project — typically early-stage science, not a clinical trial accepting patient enrollment.
  2. Some NIH-funded labs run parallel clinical studies or seek volunteers for related work. To check, contact the principal investigator or institution listed above.
  3. For full project details, budget, and progress reports, visit the official NIH RePORTER page below.
Last reviewed 2026-06-13 by the Find a Trial editorial team. Information on this page is for educational purposes and is not medical advice. Always consult qualified healthcare professionals about clinical trial participation.