Detecting early treatment-resistant changes in prostate cancer with blood and single-cell epigenetic tests

Mapping the epigenetic dynamics of prostate cancer progression: integrating liquid biopsies and single-cell epigenomics for early detection of lineage plasticity and clinical decision-making

NIH-funded research Dana-Farber Cancer Inst · NIH-11292847

This project uses blood-based liquid biopsies and single-cell epigenetic tests to look for early signs that prostate cancer is becoming resistant to hormone-blocking treatments.

Quick facts

Grant typeR01 grant
Study typeNIH-funded research
Funding institutionDana-Farber Cancer Inst NIH-funded
Lab location1 site (Boston, United States)
Project IDNIH-11292847 on NIH RePORTER

What this research studies

Researchers will collect blood and tumor samples from men with prostate cancer and analyze them for epigenetic marks that show cells are changing identity. They will apply single-cell epigenomic methods to see which tumor cells are shifting toward a neuroendocrine, treatment-resistant state. Parallel liquid biopsy tests will be used to try to detect those epigenetic changes noninvasively. The team aims to create signatures that could warn clinicians before resistance becomes clinically apparent and help guide treatment choices.

Who could benefit from this research

Good fit: Men with advanced or castration-resistant prostate cancer, especially those starting or progressing on androgen receptor signaling inhibitors like enzalutamide, would be the most relevant candidates.

Not a fit: Men with early-stage localized prostate cancer not receiving AR-targeted therapies or those without available blood or biopsy samples may not directly benefit from this work.

Why it matters

Potential benefit: If successful, this work could enable earlier detection of treatment-resistant prostate cancer and help doctors choose better therapies sooner.

How similar studies have performed: Blood-based tumor DNA tests and some epigenetic assays have shown promise for detecting resistance, but applying single-cell epigenomics to catch neuroendocrine transdifferentiation early is relatively new.

Where this research is happening

Boston, United States

Researchers

About this research

  1. This is an active NIH-funded research project — typically early-stage science, not a clinical trial accepting patient enrollment.
  2. Some NIH-funded labs run parallel clinical studies or seek volunteers for related work. To check, contact the principal investigator or institution listed above.
  3. For full project details, budget, and progress reports, visit the official NIH RePORTER page below.
Conditions Cancer BiologyCancers
Last reviewed 2026-06-10 by the Find a Trial editorial team. Information on this page is for educational purposes and is not medical advice. Always consult qualified healthcare professionals about clinical trial participation.